Hybrid Topology Relative Binding Free Energy (RBFE) Protocol ============================================================ .. _rbfe protocol api: An extension of the :class:`openfe.protocols.openmm_rfe.RelativeHybridTopologyProtocol` which purely uses OpenFF for system parameterization. Protocol API Specification -------------------------- .. module:: pontibus.protocols.relative .. autosummary:: :nosignatures: :toctree: generated/ HybridTopProtocol HybridTopProtocolResult HybridTopProtocolSettings HybridTopProtocolUnit Protocol Settings ----------------- .. module:: pontibus.protocols.relative.settings .. autopydantic_model:: HybridTopProtocolSettings :model-show-json: False :model-show-field-summary: False :model-show-config-member: False :model-show-config-summary: False :model-show-validator-members: False :model-show-validator-summary: False :field-list-validators: False :inherited-members: SettingsBaseModel :exclude-members: get_defaults :member-order: bysource